Toolbox Package Symbol

str2mass

str2mass["expression"] parses string representations of metabolites, reactions, rate and equilibrium constants and other parameters.
  • The following options can be given:
ReversibleDelimiterRegularExpression[<[=-]*>]Provide a regular expression that matches a reversible reaction delimiter
IrreversibleDelimeterRegularExpression[[=-]*>]Provide a regular expression that maches a irreversible reaction delimeter
Parse a metabolite
Parse the same metabolite with a different compartment annotation
Parse a metaboltie without compartment information
Parse a reaction
Parse parameters
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Click for copyable input
Parse a metabolite
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Parse the same metabolite with a different compartment annotation
In[3]:=
Click for copyable input
Out[3]=
Parse a metaboltie without compartment information
In[4]:=
Click for copyable input
Out[4]=
 
Parse a reaction
In[1]:=
Click for copyable input
Out[1]=
 
Parse parameters
In[1]:=
Click for copyable input
Out[1]=
In[2]:=
Click for copyable input
Out[2]=
In[3]:=
Click for copyable input
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