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The COBRA Toolbox

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Getting Started

  • Installation

Using the Toolbox

  • Tutorials
  • Functions
    • Analysis
      • Sampling
      • Sparsefba
      • Fluxenrichmentanalysis
      • Exploration
      • Geometricfba
      • Fastforest
      • Igemrna
      • Qfca
      • Gmcs
      • Robustnessanalysis
      • Relaxedfba
      • Subspaces
      • Nutritionalgorithm
      • Fva
      • Transport
      • Percentilecalc
      • Thermo
      • Persephone
      • Room
      • Ufba
      • Deletion
      • Findmiis
      • Topology
      • Rfba
      • Mdfba
      • Rumba
      • Parsimoniousfba
      • Kldistance
      • Multispecies
        • Steadycom
        • Microbiomemodelingtoolbox
          • Mgpipe
          • Pairwiseinteractionmodeling
          • Additionalanalysis
      • Icongems
      • Wholebody
      • Fba
      • Coupling
      • Dynamicfba
      • Rmta
      • Moma
    • Base
    • Dataintegration
    • Design
    • Reconstruction
    • Visualization
  • Submodules
  • FAQ

Contributing

  • How to contribute
  • Development Plan

Project Information

  • How to cite
  • Citations
  • Support
  • Contact
  • Contributors
  • Funding
The COBRA Toolbox
  • Functions
  • Analysis
  • Multispecies
  • Microbiomemodelingtoolbox

MicrobiomemodelingtoolboxΒΆ

  • Mgpipe
  • Pairwiseinteractionmodeling
  • Additionalanalysis
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