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The COBRA Toolbox

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The COBRA Toolbox
  • Functions
  • Analysis

analysis

Analysis

AnalysisΒΆ

  • Dynamicfba
  • Fluxenrichmentanalysis
  • Topology
    • Conservedmoieties
    • Extremerays
    • Fr
    • Graphhypergraphconversion
  • Deletion
    • Syntheticlethals
  • Persephone
    • Seqc_pipeline
    • Additionalfunctions
  • Transport
  • Parsimoniousfba
  • Sparsefba
  • Relaxedfba
  • Sampling
    • Chrr
    • Achr
    • Barrierround
  • Percentilecalc
  • Rumba
  • Multispecies
    • Steadycom
    • Microbiomemodelingtoolbox
  • Rfba
  • Room
  • Qfca
  • Nutritionalgorithm
  • Geometricfba
  • Wholebody
    • Pscmtoolbox
    • Io
    • Nutrition_modelling_toolbox
  • Thermo
    • Vonbertalanffy
    • Transport
    • Protons
    • Thermofba
    • Reactantcontribution
    • Formulae
    • Componentcontribution
    • Molfiles
    • Trainingmodel
    • Optcardthermo
    • Findthermoconsistentfluxsubset
    • Experimentaldesign
    • Utilities
    • Groupcontribution
    • Inchi
    • Directionalityreport
    • Thermodirectionality
    • Experimentaldata
  • Exploration
    • Surfnetsubfunctions
  • Igemrna
    • Lt2
    • Findupdownregulatedgenes
    • Filternonfluxreactions
    • Modelcreation
    • Calculatefluxshifts
    • Lt1
    • Filterratelimittingreactions
    • Inactivegenedeletion
    • Gt1
  • Findmiis
  • Kldistance
  • Subspaces
    • Rowreduce
    • Rank
    • Subspaceprojection
    • Lsqr
    • Nullspace
  • Ufba
  • Moma
  • Coupling
  • Gmcs
  • Icongems
  • Fba
  • Mdfba
  • Robustnessanalysis
  • Fva
    • Fastfva
  • Rmta
  • Fastforest
Function list

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