Functions

Analysis

• Analysis
  • Dynamicfba
  • Sparsefba
  • Rfba
  • Multispecies
  • Nutritionalgorithm
  • Geometricfba
  • Relaxedfba
  • Room
  • Exploration
  • Sampling
  • Parsimoniousfba
  • Kldistance
  • Wholebody
  • Rumba
  • Transport
  • Moma
  • Fba
  • Qfca
  • Rmta
  • Percentilecalc
  • Subspaces
  • Igemrna
  • Thermo
  • Icongems
  • Findmiis
  • Robustnessanalysis
  • Topology
  • Ufba
  • Gmcs
  • Mdfba
  • Coupling
  • Fastforest
  • Fva
  • Persephone
  • Fluxenrichmentanalysis
  • Deletion

Function list

Base

• Base
  • Utilities
  • Io
  • Paths
  • Solvers
  • Ci
  • Codeconsistency
  • Cobrarrow
  • Install

Function list

Data integration

• Dataintegration
  • Metaboannotator
  • Chemoinformatics
  • Metabotools
  • Xomicstomodel
  • Metanetxmapper
  • Transcriptomics
  • Fluxomics

Function list

Design

• Design
  • Optenvelope
  • Optforce
  • Optforcegams
  • Trimgdel

Function list

Reconstruction

• Reconstruction
  • Growthexpmatch
  • Fastgapfill
  • Comparison
  • Rbionet
  • Refinement
  • Modelgeneration
  • Metaboreport
  • Demeter

Function list

Visualization

• Visualization
  • Paint4net
  • Sammim
  • Visualizeepistasis
  • Metaboliccartography
  • Efmviz
  • Maps
  • Upsetplot
  • Eschermap
  • Createmetintrcnetwork
  • Entropicfba
  • Convert
  • Celldesigner

Function list