- FEA(model, rxnSet, group)¶
Significance analysis - Flux enrichment analysis using hypergeometric 1-sided test and FDR correction for multiple testing
resultCell = FEA(model, rxnSet, ‘subSystems’)
model: COBRA structure model rxnSet: reaction set to be enriched (vector of reaction indices e.g. 1:10) group: model.group structure e.g.
‘subSystems’ : FEA looks for significantly enriched subsystems in rxnSet
resultCell: cell structure of enriched groups
load ecoli_core_model; resultCell = FEA(modelEcore, 1:10, ‘subSystems’);