fluxEnrichmentAnalysis

FEA(model, rxnSet, group)

Significance analysis - Flux enrichment analysis using hypergeometric 1-sided test and FDR correction for multiple testing

USAGE:

resultCell = FEA(model, rxnSet, ‘subSystems’)

INPUTS:

model: COBRA structure model rxnSet: reaction set to be enriched (vector of reaction indices e.g. 1:10) group: model.group structure e.g.

‘subSystems’ : FEA looks for significantly enriched subsystems in rxnSet

OUTPUT:

resultCell: cell structure of enriched groups

Example

load ecoli_core_model; resultCell = FEA(modelEcore, 1:10, ‘subSystems’);