Transport

transportReactionBool(model, originCompartment, destinationCompartment, unidirectionalBool)

Return a boolean vector indicating which reactions transport between compartments.

USAGE:

[transportRxnBool] = transportReactionBool(model, originCompartment, destinationCompartment, unidirectionalBool)

INPUT:

model: COBRA model structure with fields:

• .S

• .mets

OPTIONAL INPUTS:

originCompartment: origin compartment (only relevant for unidirectional) destinationCompartment: destination compartment (only relevant for unidirectional) unidirectionalBool: 1 = only return transport reactions between specified

compartments in the origin to destination direction

OUTPUT:

transportRxnBool: boolean vector indicating transport reactions