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forwardReversibleFigures2(model, directions)

Figures of different classes of reactions: qualitatively forward -> quantitatively reversible

INPUT model.DrGt0

forwardReversibleFiguresKeq(model, directions, thorStandard)

Figure of qualitatively forward -> quantitatively reversible (keq)

make figure of reactions that have changed from qualitatively forward to quantitatively reversible, where all metabolites dGt0 were back calculated from Keq. Omit those reactions that are transport reactions

INPUT

model

directions must have the fields below:

directions.ChangeForwardReversible_dGfKeq

thorStandard {(0),1} use new standard reactant concentration

half way between upper and lower concentration bounds

Ronan M.T. Fleming